QIAGEN Bioinformatics. Download Clc Genomics Workbench Mac Software Advertisement CLC Genomics Workbench for Mac OS v.3.5.1 Using super-fast, integrated, high-performance computing algorithms, CLC Genomics Workbench sets a new standard for desktop based reference assembly and de novo assembly of SOLiD, Solexa, 454, and Helicos sequencing data# De novo assembly of. CLC Genomics Workbench is available for Windows, Mac OS X, and Linux platforms. It includes a number of features within the fields of genomics, transcriptomics and epigenomics, and additionally it includes all the tools of CLC Main Workbench. CLC Main Workbench v.5.6.1 CLC Main Workbench 5.6.1 provides you with a software environment which enables users to make a large number of advanced DNA, RNA, and protein sequence analysis, combined with gene expression analysis, smooth data management, and excellent graphical.
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- 1123 次查看 67 次下载
- 分类:教育
- 标签:clcs clc workbench downloads download discontinueds discontinued replaceds replaced clcs clc workbench clcs clc workbench clcs clc workbench creates create softwares software enablings enabling users user advanceds advanced
- 时间:2011年11月28日 更新 文件大小: 58.3 MB
- 开发商:CLC bio A/S 官网首页
- 支持类型: Mac Mac OS X 10.5 or later
- 支持语言:未知
来自Mac App Store官方介绍
While CLC DNA Workbench 6.5 is still available for download, it has been discontinued and replaced by CLC Main Workbench 6.6.2.
CLC DNA Workbench (was CLC Gene Workbench) creates a software environment enabling users to make a large number of advanced DNA sequence analyses, combined with smooth data management, and excellent graphical viewing and output options.
We invite you to try a fully functional demo of our program - the first four weeks are free of charge. All data created in the demo-period is fully accessible from CLC Free Workbench. Trying a fully functional demo version of CLC Gene Workbench is therefore a perfect way to access advanced DNA sequence analyses in a short period of time - free of charge.
Some analyses are:
- Assembly of DNA sequencing data
- Graphically and algorithmically advanced primer design
- Molecular cloning
- Automatic SNP annotation of sequences
- Two types of alignments
- Phylogenetics
- Motif search (known patterns)
- Pattern discovery (unknown patterns)
- BLAST
- Batch processing of multiple analyses in one work-step
- Dot plots
- Hydrophobicity analyses
- Searches on GenBank and PubMed
- Detailed log of actions/analyses performed
…更多…
v6.5版本新功能
Clc Workbench 20
Version 6.5:
New plug-ins and plug-in updates
- MLST module updated
- Possible to download MLST schemes from any Web site compatible with mlstDBnet
- When a new allele is called because the sequencing reads are not long enough, this is reported in the isolate view rather than 'New allele'
See a list of all plug-ins here.
New and improved features
- Multi-site Gateway Cloning. You can perform multi-site gateway cloning and in a few clicks create your expression clones with multiple fragments. The existing Gateway Cloning tool has been expanded so that you can easily recombine several fragments as well as continue using it for the standard Gateway Cloning.
- Process tagged sequences
- A summary report is now available with an overview of the number of reads per bar code.
- You can search for barcodes (MIDs) on both strands, supporting new 454 protocol.
- Find Binding Sites and Create Fragments improved:
- If your template sequence contains ambiguity nucleotides (like N, Y etc), these will no longer count as mismatches when checking your primers. Note that the primer base of course need to be covered by the ambiguity symbol (e.g. a T would still be a mismatch if the template sequence has an R, which means either A or G).
- Fixed: When using multiple template sequences, the choices to open or annotate a fragment from the fragment table did not work properly. They always applied to the first sequence although the fragment was located on another sequence (as indicated in the table).
- Exporting fastq format no longer includes redundant name of the read in the quality score line. Now the name only appears once per read.
Bug fixes
- Fixed: Annotations spanning the sequence from start to end did not display right when the sequence was wrapped. The annotation was only displayed on the first line.
- Fixed: Calculation of consensus sequence in read mappings: Sometimes a majority of gaps would be ignored and a base erroneously introduced in the consensus sequence. It occurs when 1) there is no coverage in an initial segment of the reference sequence, and 2) a gap is encountered in the global read alignment. From that point onwards, gap counts are included in the consensus vote, but they are taken from the start of the mapping (where they are all 0), so they are out of sync with associated base counts. High gap counts would then kick in further downstream, possibly making the consensus a gap where it should not be. We recommend checking your mapping results manually if you rely on using the consensus sequence for further analysis.
- Fixed: importing adapters for trimming and barcodes for de-multiplexing did not work properly for CSV files and empty rows in Excel files were not allowed.
- Fixed: Motif search did not exclude regions with Ns when the option 'Exclude matches in N-regions for simple motifs' was selected.
…更多…
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Clc Genomics Workbench Download
文件名 | 版本 | 下载次数 | 上传时间 | 上传者 | 下载类型 | 操作 | |
---|---|---|---|---|---|---|---|
0. | http://www.clcbio.com/index.php?id=27官网下载 | 最新 | - | - | 官方 | Mac | 点击下载 |
1. | download.clcbio.com官方原版 | v6.5 | 67 | 2011-11-28 | 网友共享 | Mac 版 | 点击下载 |
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Clc Main Workbench Download
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